Description

<dependency>
    <groupId>uk.ac.ebi.ddi.arrayexpress</groupId>
    <artifactId>experiments-reader</artifactId>
    <version>1.6</version>
</dependency>

<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
    <modelVersion>4.0.0</modelVersion>

    <parent>
        <groupId>uk.ac.ebi.ddi.arrayexpress</groupId>
        <artifactId>arrayexpress-reader</artifactId>
        <version>1.4</version>
    </parent>

    <artifactId>experiments-reader</artifactId>
    <version>1.6</version>


    <name>experiments-reader</name>
    <description>Read and create the ebe files from MetabolomeWorbench submissions</description>

    <licenses>
        <license>
            <name>Apache 2</name>
            <url>http://www.apache.org/licenses/LICENSE-2.0.txt</url>
            <distribution>repo</distribution>
            <comments>A business-friendly OSS license</comments>
        </license>
    </licenses>
    <developers>
        <developer>
            <id>ypriverol</id>
            <name>Yasset Perez-Riverol</name>
            <email>yperez@ebi.ac.uk</email>
            <organization>European Bioinformatics Institute</organization>
        </developer>
    </developers>
    <organization>
        <name>European Bioinformatics Institute</name>
        <url>http://www.ebi.ac.uk</url>
    </organization>

    <properties>
       <!-- slf4j dependency -->
        <rome.version>1.0</rome.version>
    </properties>

    <dependencies>

        <!-- logging dependencies -->
        <!-- logging dependencies -->
        <dependency>
            <groupId>org.slf4j</groupId>
            <artifactId>slf4j-api</artifactId>
        </dependency>
        <dependency>
            <groupId>org.slf4j</groupId>
            <artifactId>jcl-over-slf4j</artifactId>
        </dependency>
        <dependency>
            <groupId>ch.qos.logback</groupId>
            <artifactId>logback-core</artifactId>
        </dependency>
        <dependency>
            <groupId>ch.qos.logback</groupId>
            <artifactId>logback-classic</artifactId>
        </dependency>

        <!--jUnit-->
        <dependency>
            <groupId>junit</groupId>
            <artifactId>junit</artifactId>
        </dependency>

        <dependency>
            <groupId>com.fasterxml.jackson.core</groupId>
            <artifactId>jackson-databind</artifactId>
            <version>${jackson.databind.version}</version>
        </dependency>

        <dependency>
            <groupId>commons-io</groupId>
            <artifactId>commons-io</artifactId>
            <version>${commons.io.version}</version>
        </dependency>

        <!-- jaxb dependencies-->
        <dependency>
            <groupId>com.sun.xml.bind</groupId>
            <artifactId>jaxb-impl</artifactId>
            <version>${jaxb-xjc.version}</version>
        </dependency>
        <dependency>
            <groupId>com.sun.xml.bind</groupId>
            <artifactId>jaxb-xjc</artifactId>
            <version>${jaxb-xjc.version}</version>
        </dependency>

        <dependency>
            <groupId>org.apache.commons</groupId>
            <artifactId>commons-lang3</artifactId>
            <version>${commons.lang3.version}</version>
        </dependency>

        <dependency>
            <groupId>org.apache.httpcomponents</groupId>
            <artifactId>httpclient</artifactId>
            <version>${commons.httpclient.version}</version>
        </dependency>

        <dependency>
            <groupId>commons-cli</groupId>
            <artifactId>commons-cli</artifactId>
            <version>${common.cli.version}</version>
        </dependency>


    </dependencies>

    <build>
        <plugins>
            <plugin>
                <!-- you can use this plugin to generate the unimod object model from
                     the schema and binding files specified below. Note: this will
                     need an explicit maven goal call, since it is not integrated
                     into the standard mvn life cycle. The goal to use is:
                     org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:0.6.3:generate

                     NOTE: the code generation may overwrite existing classes, so care
                           should be taken with files that were manually modified.
                 -->
                <groupId>org.jvnet.jaxb2.maven2</groupId>
                <artifactId>maven-jaxb2-plugin</artifactId>
                <version>0.7.3</version>

                <configuration>
                    <extension>true</extension>
                    <schemaDirectory>src/main/resources</schemaDirectory>
                    <schemaIncludes>
                        <include>experiments.xsd</include>
                    </schemaIncludes>
                    <bindingDirectory>src/main/resources</bindingDirectory>
                    <bindingIncludes>
                        <include>bindings.xjb</include>
                        <!--<include>pride-unimod-bindings.xjb</include>-->
                    </bindingIncludes>
                    <generateDirectory>src/main/java2</generateDirectory>
                    <removeOldOutput>false</removeOldOutput>
                    <forceRegenerate>true</forceRegenerate>
                    <verbose>true</verbose>
                    <args>
                        <arg>-no-header</arg>
                    </args>
                </configuration>
            </plugin>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-checkstyle-plugin</artifactId>
                <version>${maven.checkstyle.version}</version>
                <executions>
                    <execution>
                        <id>checkstyle</id>
                        <phase>validate</phase>
                        <goals>
                            <goal>check</goal>
                        </goals>
                        <configuration>
                            <failOnViolation>true</failOnViolation>
                            <consoleOutput>true</consoleOutput>
                        </configuration>
                    </execution>
                </executions>
            </plugin>
        </plugins>
    </build>

</project>