Description

<dependency>
    <groupId>pl.poznan.put</groupId>
    <artifactId>BioCommons</artifactId>
    <version>3.2.1</version>
</dependency>

<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
  <modelVersion>4.0.0</modelVersion>

  <groupId>pl.poznan.put</groupId>
  <artifactId>BioCommons</artifactId>
  <version>3.2.1</version>
  <packaging>jar</packaging>

  <name>BioCommons</name>
  <description>The BioCommons library contains classes to work with 2D and 3D structural bioinformatics data. There
    are parsers for PDB and mmCIF files and many formats of 2D structure with classifications and notations used in
    the literature, as well as algorithms implementations.</description>
  <url>https://github.com/tzok/BioCommons</url>

  <licenses>
    <license>
      <name>MIT License</name>
      <url>http://www.opensource.org/licenses/mit-license.php</url>
    </license>
  </licenses>

  <developers>
    <developer>
      <name>Tomasz Zok</name>
      <email>tomasz.zok@cs.put.poznan.pl</email>
      <organization>Poznan University of Technology</organization>
      <organizationUrl>https://www.cs.put.poznan.pl/tzok/</organizationUrl>
    </developer>
  </developers>

  <scm>
    <connection>scm:git:git://github.com/tzok/BioCommons.git</connection>
    <developerConnection>scm:git:ssh://github.com:tzok/BioCommons.git</developerConnection>
    <url>https://github.com/tzok/BioCommons/tree/master</url>
  </scm>

  <properties>
    <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
  </properties>

  <dependencies>
    <dependency>
      <groupId>com.fasterxml.jackson.core</groupId>
      <artifactId>jackson-annotations</artifactId>
      <version>2.20</version>
    </dependency>

    <dependency>
      <groupId>com.fasterxml.jackson.core</groupId>
      <artifactId>jackson-databind</artifactId>
      <version>2.20.0</version>
    </dependency>

    <dependency>
      <groupId>com.google.code.findbugs</groupId>
      <artifactId>jsr305</artifactId>
      <version>3.0.2</version>
    </dependency>

    <dependency>
      <groupId>commons-io</groupId>
      <artifactId>commons-io</artifactId>
      <version>2.20.0</version>
    </dependency>

    <dependency>
      <groupId>org.apache.commons</groupId>
      <artifactId>commons-collections4</artifactId>
      <version>4.5.0</version>
    </dependency>

    <dependency>
      <groupId>org.apache.commons</groupId>
      <artifactId>commons-exec</artifactId>
      <version>1.5.0</version>
    </dependency>

    <dependency>
      <groupId>org.apache.commons</groupId>
      <artifactId>commons-lang3</artifactId>
      <version>3.19.0</version>
    </dependency>

    <dependency>
      <groupId>org.apache.commons</groupId>
      <artifactId>commons-math3</artifactId>
      <version>3.6.1</version>
    </dependency>

    <dependency>
      <groupId>org.apache.xmlgraphics</groupId>
      <artifactId>batik-anim</artifactId>
      <version>1.19</version>
    </dependency>

    <dependency>
      <groupId>org.apache.xmlgraphics</groupId>
      <artifactId>batik-awt-util</artifactId>
      <version>1.19</version>
    </dependency>

    <dependency>
      <groupId>org.apache.xmlgraphics</groupId>
      <artifactId>batik-bridge</artifactId>
      <version>1.19</version>
    </dependency>

    <dependency>
      <groupId>org.apache.xmlgraphics</groupId>
      <artifactId>batik-codec</artifactId>
      <version>1.19</version>
    </dependency>

    <dependency>
      <groupId>org.apache.xmlgraphics</groupId>
      <artifactId>batik-gvt</artifactId>
      <version>1.19</version>
    </dependency>

    <dependency>
      <groupId>org.apache.xmlgraphics</groupId>
      <artifactId>batik-svggen</artifactId>
      <version>1.19</version>
    </dependency>

    <dependency>
      <groupId>org.apache.xmlgraphics</groupId>
      <artifactId>batik-transcoder</artifactId>
      <version>1.19</version>
    </dependency>

    <dependency>
      <groupId>org.apache.xmlgraphics</groupId>
      <artifactId>batik-util</artifactId>
      <version>1.19</version>
    </dependency>

    <dependency>
      <groupId>org.apache.xmlgraphics</groupId>
      <artifactId>fop</artifactId>
      <version>2.11</version>
    </dependency>

    <dependency>
      <groupId>org.jumpmind.symmetric</groupId>
      <artifactId>symmetric-csv</artifactId>
      <version>3.5.19</version>
    </dependency>

    <dependency>
      <groupId>org.rcsb</groupId>
      <artifactId>ciftools-java</artifactId>
      <version>7.0.2</version>
    </dependency>

    <dependency>
      <groupId>org.slf4j</groupId>
      <artifactId>slf4j-api</artifactId>
      <version>2.0.17</version>
    </dependency>

    <dependency>
      <groupId>org.immutables</groupId>
      <artifactId>value</artifactId>
      <version>2.11.6</version>
      <scope>provided</scope>
    </dependency>

    <dependency>
      <groupId>ch.qos.logback</groupId>
      <artifactId>logback-classic</artifactId>
      <version>1.5.20</version>
      <scope>test</scope>
    </dependency>

    <dependency>
      <groupId>junit</groupId>
      <artifactId>junit</artifactId>
      <version>4.13.2</version>
      <scope>test</scope>
    </dependency>

    <dependency>
      <groupId>org.hamcrest</groupId>
      <artifactId>hamcrest-core</artifactId>
      <version>3.0</version>
      <scope>test</scope>
    </dependency>

    <dependency>
      <groupId>org.powermock</groupId>
      <artifactId>powermock-api-mockito2</artifactId>
      <version>2.0.9</version>
      <scope>test</scope>
    </dependency>

    <dependency>
      <groupId>org.powermock</groupId>
      <artifactId>powermock-core</artifactId>
      <version>2.0.9</version>
      <scope>test</scope>
    </dependency>

    <dependency>
      <groupId>org.powermock</groupId>
      <artifactId>powermock-module-junit4</artifactId>
      <version>2.0.9</version>
      <scope>test</scope>
    </dependency>
  </dependencies>

  <build>
    <plugins>
      <plugin>
        <groupId>com.diffplug.spotless</groupId>
        <artifactId>spotless-maven-plugin</artifactId>
        <version>3.0.0</version>
        <configuration>
          <java>
            <cleanthat></cleanthat>
            <importOrder></importOrder>
            <removeUnusedImports></removeUnusedImports>
            <googleJavaFormat>
              <reflowLongStrings>true</reflowLongStrings>
            </googleJavaFormat>
            <formatAnnotations></formatAnnotations>
          </java>
        </configuration>
        <executions>
          <execution>
            <goals>
              <goal>apply</goal>
            </goals>
            <phase>compile</phase>
          </execution>
        </executions>
      </plugin>

      <plugin>
        <groupId>com.github.ekryd.sortpom</groupId>
        <artifactId>sortpom-maven-plugin</artifactId>
        <version>4.0.0</version>
        <configuration>
          <lineSeparator>\n</lineSeparator>
          <encoding>${project.build.sourceEncoding}</encoding>
          <sortProperties>true</sortProperties>
          <keepBlankLines>true</keepBlankLines>
          <sortDependencies>scope,groupId,artifactId</sortDependencies>
          <sortPlugins>groupId,artifactId</sortPlugins>
        </configuration>
        <executions>
          <execution>
            <goals>
              <goal>sort</goal>
            </goals>
            <phase>verify</phase>
          </execution>
        </executions>
      </plugin>

      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-compiler-plugin</artifactId>
        <version>3.14.1</version>
        <configuration>
          <source>11</source>
          <target>11</target>
        </configuration>
      </plugin>

      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-dependency-plugin</artifactId>
        <version>3.9.0</version>
        <configuration>
          <usedDependencies>
            <dependency>org.apache.xmlgraphics:batik-codec</dependency>
            <dependency>ch.qos.logback:logback-classic</dependency>
          </usedDependencies>
        </configuration>
      </plugin>

      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-gpg-plugin</artifactId>
        <version>3.2.8</version>
        <executions>
          <execution>
            <id>sign-artifacts</id>
            <goals>
              <goal>sign</goal>
            </goals>
            <phase>verify</phase>
          </execution>
        </executions>
      </plugin>

      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-javadoc-plugin</artifactId>
        <version>3.12.0</version>
        <configuration>
          <source>8</source>
          <sourcepath>${project.basedir}/src/main/java;${project.basedir}/target/generated-sources/annotations</sourcepath>
          <failOnError>false</failOnError>
        </configuration>
        <executions>
          <execution>
            <id>attach-javadocs</id>
            <goals>
              <goal>jar</goal>
            </goals>
          </execution>
        </executions>
      </plugin>

      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-source-plugin</artifactId>
        <version>3.3.1</version>
        <executions>
          <execution>
            <id>attach-sources</id>
            <goals>
              <goal>jar</goal>
            </goals>
          </execution>
        </executions>
      </plugin>

      <plugin>
        <groupId>org.sonatype.central</groupId>
        <artifactId>central-publishing-maven-plugin</artifactId>
        <version>0.9.0</version>
        <extensions>true</extensions>
        <configuration>
          <publishingServerId>central</publishingServerId>
        </configuration>
      </plugin>
    </plugins>
  </build>
</project>