org.pathvisio.libgpml

pkg:maven/org.pathvisio/org.pathvisio.libgpml@4.0.3

Used in: 7 components

Overview
Overview

Versions
Versions

Dependents
Dependents

Dependencies
Dependencies

Overview

Description

libGPML is a library for reading, writing, manipulation, and conversion of files and data streams in the GPML (Graphical Pathway Markup Language) format.

Snippets

<dependency>
    <groupId>org.pathvisio</groupId>
    <artifactId>org.pathvisio.libgpml</artifactId>
    <version>4.0.3</version>
</dependency>

Maven POM File

<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 https://maven.apache.org/xsd/maven-4.0.0.xsd">
	<modelVersion>4.0.0</modelVersion>
	<groupId>org.pathvisio</groupId>
	<artifactId>org.pathvisio.libgpml</artifactId>
	<version>4.0.3</version>
	<packaging>jar</packaging>
	<name>libGPML</name>
	<description>libGPML is a library for reading, writing, manipulation, and conversion of files and data streams in the GPML (Graphical Pathway Markup Language) format.</description>
	<url>https://github.com/PathVisio/libGPML/</url>

	<properties>
		<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
		<project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
		<maven.compiler.source>11</maven.compiler.source>
		<maven.compiler.target>11</maven.compiler.target>
	</properties>

	<licenses>
		<license>
			<name>Apache License, Version 2.0</name>
			<url>http://www.apache.org/licenses/LICENSE-2.0.txt</url>
			<distribution>repo</distribution>
		</license>
	</licenses>

	<scm>
		<connection>scm:git:git://github.com/pathvisio/libGPML.git</connection>
		<developerConnection>scm:git:ssh://git@github.com/pathvisio/libGPML.git</developerConnection>
		<url>http://github.com/pathvisio/libGPML/tree/master</url>
		<tag>HEAD</tag>
	</scm>

	<distributionManagement>
		<snapshotRepository>
			<id>ossrh</id>
			<url>https://s01.oss.sonatype.org/content/repositories/snapshots</url>
		</snapshotRepository>
		<repository>
			<id>ossrh</id>
			<url>https://s01.oss.sonatype.org/service/local/staging/deploy/maven2</url>
		</repository>
	</distributionManagement>


	<build>
		<plugins>
			<plugin>
				<groupId>org.sonatype.plugins</groupId>
				<artifactId>nexus-staging-maven-plugin</artifactId>
				<version>1.6.8</version>
				<extensions>true</extensions>
				<configuration>
					<serverId>ossrh</serverId>
					<nexusUrl>https://s01.oss.sonatype.org/</nexusUrl>
					<autoReleaseAfterClose>true</autoReleaseAfterClose>
				</configuration>
			</plugin>
			<plugin>
				<groupId>org.apache.felix</groupId>
				<artifactId>maven-bundle-plugin</artifactId>
				<version>5.1.8</version>
				<extensions>true</extensions>
				<configuration>
					<instructions>
						<Bundle-Copyright> 2006-2022 BiGCaT Bioinformatics, WikiPathways</Bundle-Copyright>
						<Bundle-DocURL> http://www.pathvisio.org</Bundle-DocURL>
						<Bundle-License> http://www.apache.org/licenses/LICENSE-2.0</Bundle-License>
						<Bundle-Name>org.pathvisio.libgpml</Bundle-Name>
						<Bundle-SymbolicName>org.pathvisio.libgpml</Bundle-SymbolicName>
						<Bundle-Version>${project.version}</Bundle-Version>
						<Bundle-Vendor> PathVisio developers</Bundle-Vendor>
						<Export-Package>org.pathvisio.libgpml.*</Export-Package>
						<Import-Package> 
							javax.swing,
						 	org.osgi.framework;version="1.5.0"
						</Import-Package>
						<Require-Bundle>
							org.apache.servicemix.bundles.jdom;bundle-version="2.0.6",
 							org.bridgedb;bundle-version="3.0.20",
						 	org.bridgedb.bio;bundle-version="3.0.20",
						 	org.bridgedb.rdb;bundle-version="3.0.20",
							org.apache.commons.commons-collections4;bundle-version="4.4"
						</Require-Bundle>
					</instructions>
				</configuration>
				<executions>
					<execution>
						<id>bundle-manifest</id>
						<phase>process-classes</phase>
						<goals>
							<goal>manifest</goal>
						</goals>
					</execution>
				</executions>
			</plugin>
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-jar-plugin</artifactId>
				<version>3.3.0</version>
				<configuration>
					<archive>
						<manifestFile>${project.build.outputDirectory}/META-INF/MANIFEST.MF</manifestFile>
					</archive>
				</configuration>
			</plugin>
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-compiler-plugin</artifactId>
				<version>3.10.1</version>
				<configuration>
					<source>11</source>
					<target>11</target>
				</configuration>
			</plugin>
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-source-plugin</artifactId>
				<version>3.2.1</version>
				<executions>
					<execution>
						<id>attach-sources</id>
						<goals>
							<goal>jar-no-fork</goal>
						</goals>
					</execution>
				</executions>
			</plugin>
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-javadoc-plugin</artifactId>
				<version>3.4.1</version>
				<executions>
					<execution>
						<id>attach-javadocs</id>
						<goals>
							<goal>jar</goal>
						</goals>
					</execution>
					<execution>
						<id>aggregate</id>
						<goals>
							<goal>aggregate</goal>
						</goals>
						<phase>site</phase>
						<configuration></configuration>
					</execution>
				</executions>
			</plugin>
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-gpg-plugin</artifactId>
				<version>1.6</version>
				<executions>
					<execution>
						<id>sign-artifacts</id>
						<phase>verify</phase>
						<goals>
							<goal>sign</goal>
						</goals>
					</execution>
				</executions>
			</plugin>
			<plugin>
				<artifactId>maven-surefire-plugin</artifactId>
				<version>3.0.0-M7</version>
			</plugin>
			<plugin>
				<groupId>org.jacoco</groupId>
				<artifactId>jacoco-maven-plugin</artifactId>
				<version>0.8.8</version>
				<executions>
					<execution>
						<id>start-agent</id>
						<goals>
							<goal>prepare-agent</goal>
						</goals>
					</execution>
					<execution>
						<id>generate-report</id>
						<goals>
							<goal>report</goal>
						</goals>
					</execution>
				</executions>
			</plugin>
		</plugins>
	</build>

	<dependencies>
		<!-- JDOM -->
		<dependency>
			<groupId>org.apache.servicemix.bundles</groupId>
			<artifactId>org.apache.servicemix.bundles.jdom</artifactId>
			<version>2.0.6.1_1</version>
		</dependency>
		<!-- BridgeDb -->
		<dependency>
			<groupId>org.bridgedb</groupId>
			<artifactId>org.bridgedb</artifactId>
			<version>3.0.20</version>
		</dependency>
		<dependency>
			<groupId>org.bridgedb</groupId>
			<artifactId>org.bridgedb.bio</artifactId>
			<version>3.0.20</version>
		</dependency>
		<dependency>
			<groupId>org.bridgedb</groupId>
			<artifactId>org.bridgedb.rdb</artifactId>
			<version>3.0.20</version>
		</dependency>
		<!-- Apache Commons -->
		<dependency>
			<groupId>org.apache.commons</groupId>
			<artifactId>commons-collections4</artifactId>
			<version>4.4</version>
		</dependency>
		<dependency>
			<groupId>commons-lang</groupId>
			<artifactId>commons-lang</artifactId>
			<version>2.6</version>
		</dependency>
		<!-- JUnit -->
		<dependency>
			<groupId>junit</groupId>
			<artifactId>junit</artifactId>
			<version>4.13.2</version>
		</dependency>
	</dependencies>

	<developers>
		<developer>
			<id>tina</id>
			<name>Martina Summer-Kutmon</name>
		</developer>
                <developer>
                        <id>egonw</id>
                        <name>Egon Willighagen</name>
                </developer>
                <developer>
                        <id>finterly</id>
                        <name>Finterly Hu</name>
                </developer>
	</developers>

</project>

Metadata

Age:2 years ago

Licenses:

Apache License, Version 2.0

Organization

org.pathvisio

External Resources

Project URL

Source Control

Known Contributors

Finterly HuMartina Summer-KutmonEgon Willighagen

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