Description

<dependency>
    <groupId>org.nanopub</groupId>
    <artifactId>nanopub</artifactId>
    <version>1.88.0</version>
</dependency>

<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
  <modelVersion>4.0.0</modelVersion>
  <groupId>org.nanopub</groupId>
  <artifactId>nanopub</artifactId>
  <packaging>jar</packaging>
  <version>1.88.0</version>
  <name>nanopub</name>
  <description>Java library for nanopublications based on RDF4J</description>
  <url>https://github.com/Nanopublication/nanopub-java</url>
  <developers>
    <developer>
      <id>tkuhn</id>
      <name>Tobias Kuhn</name>
      <email>kuhntobias@gmail.com</email>
      <url>http://www.tkuhn.org/</url>
    </developer>
  </developers>
  <licenses>
    <license>
      <name>MIT license</name>
      <url>http://www.opensource.org/licenses/mit-license</url>
    </license>
  </licenses>

  <properties>
    <!-- Build -->
    <maven.compiler.source>21</maven.compiler.source>
    <maven.compiler.target>21</maven.compiler.target>
    <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
    <rdf4j.version>5.3.0</rdf4j.version>
    <slf4j.version>2.0.17</slf4j.version>
    <commons-lang3.version>3.20.0</commons-lang3.version>
    <commons-compress.version>1.28.0</commons-compress.version>
    <guava.version>33.6.0-jre</guava.version>
    <gson.version>2.14.0</gson.version>
    <jcommander.version>1.82</jcommander.version>
    <mimeparse.version>0.1.3.3</mimeparse.version>
    <httpclient.version>4.5.14</httpclient.version>
    <trustyuri.version>1.24.1</trustyuri.version>
    <jelly-rdf4j.version>3.7.2</jelly-rdf4j.version>
    <mongo-java-driver.version>3.12.14</mongo-java-driver.version>
    <jakarta.activation.version>2.1.3</jakarta.activation.version>
    <jakarta.xml.bind.version>4.0.5</jakarta.xml.bind.version>
    <opencsv.version>5.12.0</opencsv.version>
    <snakeyaml.version>2.6</snakeyaml.version>

    <!-- Test dependencies -->
    <nanopub-testsuite-connector.version>1.0.0</nanopub-testsuite-connector.version>
    <junit-jupiter.version>6.0.3</junit-jupiter.version>
    <hamcrest.version>3.0</hamcrest.version>
    <mockito.version>5.23.0</mockito.version>

    <!-- Plugins -->
    <maven-surefire-plugin.version>3.5.3</maven-surefire-plugin.version>
    <maven-release-plugin.version>3.1.1</maven-release-plugin.version>
    <central-publishing-plugin.version>0.10.0</central-publishing-plugin.version>
    <maven-dependency-plugin.version>3.8.1</maven-dependency-plugin.version>
    <maven-jar-plugin.version>3.4.2</maven-jar-plugin.version>
    <maven-failsafe-plugin.version>3.5.3</maven-failsafe-plugin.version>
    <build-helper-plugin.version>3.6.0</build-helper-plugin.version>
    <jacoco-plugin.version>0.8.13</jacoco-plugin.version>
    <maven-assembly-plugin.version>3.7.1</maven-assembly-plugin.version>
    <maven-source-plugin.version>3.3.1</maven-source-plugin.version>
    <maven-javadoc-plugin.version>3.11.2</maven-javadoc-plugin.version>
    <maven-gpg-plugin.version>3.2.5</maven-gpg-plugin.version>
  </properties>

  <dependencyManagement>
    <dependencies>
      <dependency>
        <groupId>org.junit</groupId>
        <artifactId>junit-bom</artifactId>
        <version>${junit-jupiter.version}</version>
        <type>pom</type>
        <scope>import</scope>
      </dependency>
    </dependencies>
  </dependencyManagement>

  <dependencies>
    <dependency>
      <groupId>org.apache.commons</groupId>
      <artifactId>commons-lang3</artifactId>
      <version>${commons-lang3.version}</version>
    </dependency>
    <dependency>
      <groupId>org.nanopub</groupId>
      <artifactId>nanopub-testsuite-connector</artifactId>
      <version>${nanopub-testsuite-connector.version}</version>
      <scope>test</scope>
    </dependency>
    <dependency>
      <groupId>org.junit.jupiter</groupId>
      <artifactId>junit-jupiter</artifactId>
      <scope>test</scope>
    </dependency>
    <dependency>
      <groupId>org.eclipse.rdf4j</groupId>
      <artifactId>rdf4j-rio-trig</artifactId>
      <version>${rdf4j.version}</version>
    </dependency>
    <dependency>
      <groupId>org.eclipse.rdf4j</groupId>
      <artifactId>rdf4j-rio-trix</artifactId>
      <version>${rdf4j.version}</version>
    </dependency>
    <dependency>
      <groupId>org.eclipse.rdf4j</groupId>
      <artifactId>rdf4j-rio-nquads</artifactId>
      <version>${rdf4j.version}</version>
    </dependency>
    <dependency>
      <groupId>org.eclipse.rdf4j</groupId>
      <artifactId>rdf4j-rio-jsonld</artifactId>
      <version>${rdf4j.version}</version>
    </dependency>
    <dependency>
      <groupId>org.eclipse.rdf4j</groupId>
      <artifactId>rdf4j-repository-sparql</artifactId>
      <version>${rdf4j.version}</version>
    </dependency>
    <dependency>
      <groupId>org.eclipse.rdf4j</groupId>
      <artifactId>rdf4j-shacl</artifactId>
      <version>${rdf4j.version}</version>
    </dependency>
    <dependency>
      <groupId>com.google.guava</groupId>
      <artifactId>guava</artifactId>
      <version>${guava.version}</version>
    </dependency>
    <dependency>
      <groupId>org.slf4j</groupId>
      <artifactId>slf4j-api</artifactId>
      <version>${slf4j.version}</version>
    </dependency>
    <dependency>
      <groupId>org.slf4j</groupId>
      <artifactId>slf4j-simple</artifactId>
      <version>${slf4j.version}</version>
      <scope>test</scope>
    </dependency>
    <dependency>
      <groupId>org.hamcrest</groupId>
      <artifactId>hamcrest</artifactId>
      <version>${hamcrest.version}</version>
      <scope>test</scope>
    </dependency>
    <dependency>
      <groupId>com.beust</groupId>
      <artifactId>jcommander</artifactId>
      <version>${jcommander.version}</version>
    </dependency>
    <dependency>
      <groupId>com.google.code.gson</groupId>
      <artifactId>gson</artifactId>
      <version>${gson.version}</version>
    </dependency>
    <dependency>
      <groupId>org.commonjava.mimeparse</groupId>
      <artifactId>mimeparse</artifactId>
      <version>${mimeparse.version}</version>
    </dependency>
    <dependency>
      <groupId>org.apache.httpcomponents</groupId>
      <artifactId>httpclient</artifactId>
      <version>${httpclient.version}</version>
    </dependency>
    <dependency>
      <groupId>net.trustyuri</groupId>
      <artifactId>trustyuri</artifactId>
      <version>${trustyuri.version}</version>
    </dependency>
    <dependency>
      <groupId>eu.neverblink.jelly</groupId>
      <artifactId>jelly-rdf4j</artifactId>
      <version>${jelly-rdf4j.version}</version>
    </dependency>
    <dependency>
      <groupId>org.mongodb</groupId>
      <artifactId>mongo-java-driver</artifactId>
      <version>${mongo-java-driver.version}</version>
    </dependency>
    <dependency>
      <groupId>jakarta.activation</groupId>
      <artifactId>jakarta.activation-api</artifactId>
      <version>${jakarta.activation.version}</version>
    </dependency>
    <dependency>
      <groupId>jakarta.xml.bind</groupId>
      <artifactId>jakarta.xml.bind-api</artifactId>
      <version>${jakarta.xml.bind.version}</version>
    </dependency>
    <dependency>
      <groupId>org.apache.commons</groupId>
      <artifactId>commons-compress</artifactId>
      <version>${commons-compress.version}</version>
    </dependency>
    <dependency>
      <groupId>com.opencsv</groupId>
      <artifactId>opencsv</artifactId>
      <version>${opencsv.version}</version>
    </dependency>
    <dependency>
      <groupId>org.yaml</groupId>
      <artifactId>snakeyaml</artifactId>
      <version>${snakeyaml.version}</version>
    </dependency>
    <dependency>
      <groupId>org.mockito</groupId>
      <artifactId>mockito-core</artifactId>
      <version>${mockito.version}</version>
      <scope>test</scope>
    </dependency>
  </dependencies>

  <scm>
    <url>https://github.com/Nanopublication/nanopub-java</url>
    <connection>scm:git:git@github.com:Nanopublication/nanopub-java.git</connection>
    <developerConnection>scm:git:git@github.com:Nanopublication/nanopub-java.git</developerConnection>
    <tag>v@{project.version}</tag>
  </scm>

  <build>
    <plugins>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-surefire-plugin</artifactId>
        <version>${maven-surefire-plugin.version}</version>
        <configuration>
          <!--suppress UnresolvedMavenProperty -->
          <argLine>@{argLine} -javaagent:${org.mockito:mockito-core:jar}</argLine>
        </configuration>
      </plugin>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-release-plugin</artifactId>
        <version>${maven-release-plugin.version}</version>
        <configuration>
          <autoVersionSubmodules>true</autoVersionSubmodules>
          <useReleaseProfile>false</useReleaseProfile>
          <releaseProfiles>release</releaseProfiles>
          <goals>deploy</goals>
        </configuration>
      </plugin>
      <plugin>
        <groupId>org.sonatype.central</groupId>
        <artifactId>central-publishing-maven-plugin</artifactId>
        <version>${central-publishing-plugin.version}</version>
        <extensions>true</extensions>
        <configuration>
          <publishingServerId>central</publishingServerId>
          <autoPublish>true</autoPublish>
          <waitUntil>published</waitUntil>
          <centralSnapshotsUrl>https://central.sonatype.com/repository/maven-snapshots/</centralSnapshotsUrl>
        </configuration>
      </plugin>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-dependency-plugin</artifactId>
        <version>${maven-dependency-plugin.version}</version>
        <executions>
          <execution>
            <id>build-classpath</id>
            <phase>generate-sources</phase>
            <goals>
              <goal>build-classpath</goal>
              <goal>properties</goal>
            </goals>
            <configuration>
              <outputFile>classpath.txt</outputFile>
            </configuration>
          </execution>
        </executions>
      </plugin>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-jar-plugin</artifactId>
        <version>${maven-jar-plugin.version}</version>
      </plugin>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-failsafe-plugin</artifactId>
        <version>${maven-failsafe-plugin.version}</version>
        <configuration>
          <includes>
            <include>**/*IT</include>
          </includes>
        </configuration>
        <executions>
          <execution>
            <id>integration-test</id>
            <goals>
              <goal>integration-test</goal>
            </goals>
          </execution>
          <execution>
            <id>verify</id>
            <goals>
              <goal>verify</goal>
            </goals>
          </execution>
        </executions>
      </plugin>
      <plugin>
        <groupId>org.codehaus.mojo</groupId>
        <artifactId>build-helper-maven-plugin</artifactId>
        <version>${build-helper-plugin.version}</version>
        <executions>
          <execution>
            <id>add-test-source</id>
            <phase>process-resources</phase>
            <goals>
              <goal>add-test-source</goal>
            </goals>
            <configuration>
              <sources>
                <source>src/integration-test/java</source>
              </sources>
            </configuration>
          </execution>
        </executions>
      </plugin>
      <plugin>
        <groupId>org.jacoco</groupId>
        <artifactId>jacoco-maven-plugin</artifactId>
        <version>${jacoco-plugin.version}</version>
        <executions>
          <execution>
            <goals>
              <goal>prepare-agent</goal>
            </goals>
          </execution>
          <execution>
            <id>generate-code-coverage-report</id>
            <phase>test</phase>
            <goals>
              <goal>report</goal>
            </goals>
          </execution>
        </executions>
      </plugin>
    </plugins>
  </build>

  <distributionManagement>
    <snapshotRepository>
      <id>central.snapshot</id>
      <name>Maven Central Repository Snapshot</name>
      <url>https://central.sonatype.com/repository/maven-snapshots/</url>
    </snapshotRepository>
  </distributionManagement>

  <profiles>
    <profile>
      <id>cli</id>
      <activation>
        <property>
          <name>env.CI</name>
        </property>
      </activation>
      <dependencies>
        <dependency>
          <groupId>org.slf4j</groupId>
          <artifactId>slf4j-simple</artifactId>
          <version>${slf4j.version}</version>
          <scope>runtime</scope>
        </dependency>
      </dependencies>

      <build>
        <plugins>
          <plugin>
            <artifactId>maven-assembly-plugin</artifactId>
            <version>${maven-assembly-plugin.version}</version>
            <configuration>
              <archive>
                <manifest>
                  <mainClass>org.nanopub.Run</mainClass>
                </manifest>
              </archive>
              <descriptorRefs>
                <descriptorRef>jar-with-dependencies</descriptorRef>
              </descriptorRefs>
            </configuration>
            <executions>
              <execution>
                <id>make-cli-jar</id>
                <phase>package</phase>
                <goals>
                  <goal>single</goal>
                </goals>
              </execution>
            </executions>
          </plugin>
        </plugins>
      </build>

    </profile>
    <profile>
      <id>release</id>
      <activation>
        <property>
          <name>env.CI</name>
        </property>
      </activation>
      <build>
        <plugins>
          <plugin>
            <groupId>org.apache.maven.plugins</groupId>
            <artifactId>maven-source-plugin</artifactId>
            <version>${maven-source-plugin.version}</version>
            <executions>
              <execution>
                <id>attach-sources</id>
                <goals>
                  <goal>jar-no-fork</goal>
                </goals>
              </execution>
            </executions>
          </plugin>
          <plugin>
            <groupId>org.apache.maven.plugins</groupId>
            <artifactId>maven-javadoc-plugin</artifactId>
            <version>${maven-javadoc-plugin.version}</version>
            <executions>
              <execution>
                <id>attach-javadocs</id>
                <goals>
                  <goal>jar</goal>
                </goals>
                <configuration>
                  <failOnError>false</failOnError>
                </configuration>
              </execution>
            </executions>
          </plugin>
          <plugin>
            <groupId>org.apache.maven.plugins</groupId>
            <artifactId>maven-gpg-plugin</artifactId>
            <version>${maven-gpg-plugin.version}</version>
            <executions>
              <execution>
                <id>sign-artifacts</id>
                <phase>verify</phase>
                <goals>
                  <goal>sign</goal>
                </goals>
              </execution>
            </executions>
            <configuration>
              <gpgArguments>
                <arg>--pinentry-mode</arg>
                <arg>loopback</arg>
              </gpgArguments>
              <executable>gpg</executable>
            </configuration>
          </plugin>
        </plugins>
      </build>
    </profile>
  </profiles>

</project>