Description

<dependency>
    <groupId>org.gorpipe.gor</groupId>
    <artifactId>gor-gortools</artifactId>
    <version>3.7.0</version>
</dependency>

<?xml version="1.0" encoding="UTF-8"?>
<project xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd" xmlns="http://maven.apache.org/POM/4.0.0"
    xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <!-- This module was also published with a richer model, Gradle metadata,  -->
  <!-- which should be used instead. Do not delete the following line which  -->
  <!-- is to indicate to Gradle or any Gradle module metadata file consumer  -->
  <!-- that they should prefer consuming it instead. -->
  <!-- do_not_remove: published-with-gradle-metadata -->
  <modelVersion>4.0.0</modelVersion>
  <groupId>org.gorpipe.gor</groupId>
  <artifactId>gor-gortools</artifactId>
  <version>3.7.0</version>
  <name>Gorpipe</name>
  <description>GORpipe allows analysis of large sets of genomic and phenotypic tabular data using a declarative query language in a parallel execution engine</description>
  <url>http://gorpipe.org</url>
  <licenses>
    <license>
      <name>GNU Affero General Public License</name>
      <url>https://www.gnu.org/licenses/agpl-3.0.en.html</url>
    </license>
  </licenses>
  <developers>
    <developer>
      <id>gisli</id>
      <name>Gisli Magnusson</name>
      <email>gisli@genuitysci.com</email>
    </developer>
    <developer>
      <id>hakon</id>
      <name>Hakon Gudbjartsson</name>
      <email>hakon@genuitysci.com</email>
    </developer>
    <developer>
      <id>sigmar</id>
      <name>Sigmar Stefansson</name>
      <email>sigmar@genuitysci.com</email>
    </developer>
    <developer>
      <id>vidar</id>
      <name>Vidar Hrafnkelsson</name>
      <email>vidar@genuitysci.com</email>
    </developer>
  </developers>
  <scm>
    <connection>scm:git:git://github.com/gorpipe/gor.git</connection>
    <developerConnection>scm:git:ssh://github.com/gorpipe/gor.git</developerConnection>
    <url>http://docs.gorpipe.org/</url>
  </scm>
  <dependencies>
    <dependency>
      <groupId>org.scala-lang</groupId>
      <artifactId>scala-reflect</artifactId>
      <version>2.12.13</version>
      <scope>compile</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.slf4j</groupId>
      <artifactId>jcl-over-slf4j</artifactId>
      <version>1.7.30</version>
      <scope>compile</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.antlr</groupId>
      <artifactId>antlr4</artifactId>
      <version>4.7</version>
      <scope>compile</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.scala-lang.modules</groupId>
      <artifactId>scala-parser-combinators_2.12</artifactId>
      <version>1.1.2</version>
      <scope>compile</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.gorpipe.gor</groupId>
      <artifactId>gor-model</artifactId>
      <version>3.7.0</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.gorpipe.gor</groupId>
      <artifactId>gor-base</artifactId>
      <version>3.7.0</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.gorpipe.gor</groupId>
      <artifactId>gor-util</artifactId>
      <version>3.7.0</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.freemarker</groupId>
      <artifactId>freemarker</artifactId>
      <version>2.3.19</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.yaml</groupId>
      <artifactId>snakeyaml</artifactId>
      <version>1.25</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.scala-lang</groupId>
      <artifactId>scala-compiler</artifactId>
      <version>2.12.13</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>com.fasterxml.jackson.core</groupId>
      <artifactId>jackson-databind</artifactId>
      <version>2.12.1</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.scalanlp</groupId>
      <artifactId>breeze_2.12</artifactId>
      <version>1.1</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>info.picocli</groupId>
      <artifactId>picocli</artifactId>
      <version>4.6.1</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>de.tototec</groupId>
      <artifactId>de.tototec.cmdoption</artifactId>
      <version>0.7.0</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>colt</groupId>
      <artifactId>colt</artifactId>
      <version>1.2.0</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>info.picocli</groupId>
      <artifactId>picocli-shell-jline3</artifactId>
      <version>4.6.1</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>commons-io</groupId>
      <artifactId>commons-io</artifactId>
      <version>2.6</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>commons-lang</groupId>
      <artifactId>commons-lang</artifactId>
      <version>2.6</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>com.github.samtools</groupId>
      <artifactId>htsjdk</artifactId>
      <version>2.23.0</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.aeonbits.owner</groupId>
      <artifactId>owner</artifactId>
      <version>1.0.12</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.apache.parquet</groupId>
      <artifactId>parquet-common</artifactId>
      <version>1.11.1</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.apache.parquet</groupId>
      <artifactId>parquet-column</artifactId>
      <version>1.11.1</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.apache.parquet</groupId>
      <artifactId>parquet-hadoop</artifactId>
      <version>1.11.1</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.apache.hadoop</groupId>
      <artifactId>hadoop-common</artifactId>
      <version>3.3.0</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.apache.hadoop</groupId>
      <artifactId>hadoop-mapreduce-client-core</artifactId>
      <version>3.3.0</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.reflections</groupId>
      <artifactId>reflections</artifactId>
      <version>0.9.12</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>ch.qos.logback</groupId>
      <artifactId>logback-classic</artifactId>
      <version>1.2.3</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>net.logstash.logback</groupId>
      <artifactId>logstash-logback-encoder</artifactId>
      <version>6.2</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>io.prometheus</groupId>
      <artifactId>simpleclient</artifactId>
      <version>0.10.0</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>io.kubernetes</groupId>
      <artifactId>client-java</artifactId>
      <version>10.0.0</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <artifactId>slf4j-simple</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>slf4j-log4j12</artifactId>
          <groupId>org.slf4j</groupId>
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        <exclusion>
          <artifactId>log4j</artifactId>
          <groupId>log4j</groupId>
        </exclusion>
        <exclusion>
          <artifactId>commons-logging</artifactId>
          <groupId>*</groupId>
        </exclusion>
      </exclusions>
    </dependency>
  </dependencies>
</project>