biojava-legacy
Used in:
components
- OverviewOverview
- VersionsVersions
- DependentsDependents
- DependenciesDependencies
<dependency>
<groupId>org.biojava</groupId>
<artifactId>biojava-legacy</artifactId>
<version>1.9.5</version>
</dependency><?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
<groupId>org.sonatype.oss</groupId>
<artifactId>oss-parent</artifactId>
<version>9</version>
</parent>
<groupId>org.biojava</groupId>
<artifactId>biojava-legacy</artifactId>
<packaging>pom</packaging>
<version>1.9.5</version>
<name>biojava-legacy</name>
<description>BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It provides analytical and statistical routines, parsers for common file formats and allows the manipulation of sequences and 3D structures. The goal of the biojava project is to facilitate rapid application development for bioinformatics.</description>
<url>http://www.biojava.org</url>
<organization>
<name>BioJava</name>
<url>http://www.biojava.org</url>
</organization>
<licenses>
<license>
<name>GNU LGPL v2</name>
<url>http://www.gnu.org/licenses/old-licenses/lgpl-2.1.txt</url>
<distribution>repo</distribution>
</license>
</licenses>
<scm>
<connection>scm:git:https://github.com/biojava/biojava-legacy</connection>
<developerConnection>scm:git:https://github.com/biojava/biojava-legacy</developerConnection>
<url>https://github.com/biojava/biojava-legacy</url>
<tag>biojava-legacy-1.9.5</tag>
</scm>
<developers>
<developer>
<name>Amr AL-HOSSARY</name>
</developer>
<developer>
<name>Spencer Bliven</name>
</developer>
<developer>
<name>Hannes Brandstätter-Müller</name>
</developer>
<developer>
<name>Michael Heuer</name>
</developer>
<developer>
<name>Ryan Larson</name>
</developer>
<developer>
<name>Andreas Prlic</name>
</developer>
<developer>
<name>SFoote</name>
</developer>
<developer>
<name>George Waldon</name>
</developer>
</developers>
<properties>
<jdk.version>1.8</jdk.version>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<project.build.targetEncoding>UTF-8</project.build.targetEncoding>
<maxmem>512m</maxmem>
</properties>
<build>
<pluginManagement>
<plugins>
<plugin>
<artifactId>maven-clean-plugin</artifactId>
<version>3.1.0</version>
</plugin>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.8.1</version>
<configuration>
<source>${jdk.version}</source>
<target>${jdk.version}</target>
</configuration>
</plugin>
<plugin>
<artifactId>maven-dependency-plugin</artifactId>
<version>3.1.2</version>
</plugin>
<plugin>
<artifactId>maven-deploy-plugin</artifactId>
<version>3.0.0-M1</version>
</plugin>
<plugin>
<artifactId>maven-gpg-plugin</artifactId>
<version>1.6</version>
</plugin>
<plugin>
<artifactId>maven-install-plugin</artifactId>
<version>3.0.0-M1</version>
</plugin>
<plugin>
<artifactId>maven-jar-plugin</artifactId>
<version>3.2.0</version>
</plugin>
<plugin>
<artifactId>maven-javadoc-plugin</artifactId>
<version>3.2.0</version>
<configuration>
<breakiterator>true</breakiterator>
<quiet>true</quiet>
<source>${jdk.version}</source>
<verbose>false</verbose>
<linksource>true</linksource>
<detectlinks>true</detectlinks>
<doclint>none</doclint>
<additionalOptions>--allow-script-in-comments</additionalOptions>
<footer><script src="http://www.google-analytics.com/urchin.js" type="text/javascript"></script><script type="text/javascript">_uacct = "UA-1326640-1";urchinTracker();</script></footer>
</configuration>
</plugin>
<plugin>
<artifactId>maven-release-plugin</artifactId>
<version>3.0.0-M1</version>
<configuration>
<autoVersionSubmodules>true</autoVersionSubmodules>
</configuration>
</plugin>
<plugin>
<artifactId>maven-resources-plugin</artifactId>
<version>3.2.0</version>
</plugin>
<plugin>
<artifactId>maven-site-plugin</artifactId>
<version>3.9.1</version>
</plugin>
<plugin>
<artifactId>maven-source-plugin</artifactId>
<version>3.2.1</version>
</plugin>
<plugin>
<artifactId>maven-surefire-plugin</artifactId>
<version>3.0.0-M5</version>
<configuration>
<argLine>-Xmx1g</argLine>
</configuration>
</plugin>
<plugin>
<groupId>org.jvnet.jaxb2.maven2</groupId>
<artifactId>maven-jaxb2-plugin</artifactId>
<version>0.14.0</version>
</plugin>
</plugins>
</pluginManagement>
</build>
<dependencyManagement>
<dependencies>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>4.13.1</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>commons-dbcp</groupId>
<artifactId>commons-dbcp</artifactId>
<version>1.2.2</version>
</dependency>
<dependency>
<groupId>javax.persistence</groupId>
<artifactId>persistence-api</artifactId>
<version>1.0</version>
</dependency>
<dependency>
<groupId>javax.xml.bind</groupId>
<artifactId>jaxb-api</artifactId>
<version>2.2</version>
</dependency>
<dependency>
<groupId>org.jgrapht</groupId>
<artifactId>jgrapht-jdk1.5</artifactId>
<version>0.7.3</version>
</dependency>
<dependency>
<groupId>xerces</groupId>
<artifactId>xercesImpl</artifactId>
<version>2.12.0</version>
</dependency>
</dependencies>
</dependencyManagement>
<reporting>
<plugins>
<plugin>
<artifactId>maven-javadoc-plugin</artifactId>
<version>3.2.0</version>
<configuration>
<aggregate>true</aggregate>
<breakiterator>true</breakiterator>
<quiet>true</quiet>
<source>${jdk.version}</source>
<verbose>false</verbose>
<linksource>true</linksource>
<detectlinks>true</detectlinks>
<doclint>none</doclint>
<additionalOptions>--allow-script-in-comments</additionalOptions>
<footer><script src="http://www.google-analytics.com/urchin.js" type="text/javascript"></script><script type="text/javascript">_uacct = "UA-1326640-1";urchinTracker();</script></footer>
</configuration>
</plugin>
<plugin>
<artifactId>maven-project-info-reports-plugin</artifactId>
<version>3.1.1</version>
<reportSets>
<reportSet>
<reports>
<report>index</report>
<report>summary</report>
<report>modules</report>
<report>scm</report>
<report>dependency-management</report>
<report>dependencies</report>
<report>dependency-convergence</report>
<report>distribution-management</report>
</reports>
</reportSet>
</reportSets>
</plugin>
</plugins>
</reporting>
<modules>
<module>core</module>
<module>alignment</module>
<module>biosql</module>
<module>blast</module>
<module>bytecode</module>
<module>gui</module>
<module>sequencing</module>
<module>phylo</module>
</modules>
<profiles>
<profile>
<!-- Override maven plugin versions in release profile -->
<id>sonatype-oss-release</id>
<build>
<plugins>
<plugin>
<artifactId>maven-enforcer-plugin</artifactId>
<version>3.0.0-M3</version>
</plugin>
<plugin>
<artifactId>maven-gpg-plugin</artifactId>
<version>1.6</version>
</plugin>
<plugin>
<artifactId>maven-jar-plugin</artifactId>
<version>3.2.0</version>
</plugin>
<plugin>
<artifactId>maven-javadoc-plugin</artifactId>
<version>3.2.0</version>
</plugin>
<plugin>
<artifactId>maven-source-plugin</artifactId>
<version>3.2.1</version>
</plugin>
</plugins>
</build>
</profile>
</profiles>
</project>