Description

<dependency>
    <groupId>org.biojava</groupId>
    <artifactId>biojava-alignment</artifactId>
    <version>5.0.0-alpha2</version>
</dependency>

<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
	<modelVersion>4.0.0</modelVersion>
	<parent>
		<artifactId>biojava</artifactId>
		<groupId>org.biojava</groupId>
		<version>5.0.0-alpha2</version>
	</parent>
	<artifactId>biojava-alignment</artifactId>
	<name>biojava-alignment</name>

	<licenses>
		<license>
			<name>GNU LGPL v2</name>
			<url>http://www.gnu.org/licenses/old-licenses/lgpl-2.1.txt</url>
			<distribution>repo</distribution>
		</license>
	</licenses>

	<url>http://www.biojava.org</url>
	<properties>
		<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
	</properties>
	<build>
		<plugins>

			<!-- Excluding demo package is required for avoiding namespace clashes 
				(demo package is in all modules) for signing the jar. See issue #387 -->
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-jar-plugin</artifactId>
				<configuration>
					<excludes>
						<exclude>demo/**</exclude>
					</excludes>
				</configuration>
			</plugin>

		</plugins>
	</build>
	<dependencies>
		<dependency>
			<groupId>junit</groupId>
			<artifactId>junit</artifactId>
			<scope>test</scope>
		</dependency>
		<dependency>
			<groupId>org.biojava</groupId>
			<artifactId>biojava-core</artifactId>
			<version>5.0.0-alpha2</version>
			<scope>compile</scope>
		</dependency>
		<dependency>
			<groupId>org.biojava.thirdparty</groupId>
			<artifactId>forester</artifactId>
		</dependency>
		<!-- logging dependencies (managed by parent pom, don't set versions or 
			scopes here) -->
		<dependency>
			<groupId>org.slf4j</groupId>
			<artifactId>slf4j-api</artifactId>
		</dependency>
		<!-- binding for log4j2, scope=runTime set in parent pom -->
		<dependency>
			<groupId>org.apache.logging.log4j</groupId>
			<artifactId>log4j-slf4j-impl</artifactId>
		</dependency>
		<dependency>
			<groupId>org.apache.logging.log4j</groupId>
			<artifactId>log4j-api</artifactId>
		</dependency>
		<dependency>
			<groupId>org.apache.logging.log4j</groupId>
			<artifactId>log4j-core</artifactId>
		</dependency>
		<dependency>
			<groupId>org.biojava</groupId>
			<artifactId>biojava-phylo</artifactId>
			<version>5.0.0-alpha2</version>
		</dependency>
	</dependencies>
</project>