Description

<dependency>
    <groupId>org.biojava.thirdparty</groupId>
    <artifactId>forester</artifactId>
    <version>1.039</version>
</dependency>

<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">

	<!-- for releasing to Maven Central / OSS Sonatype -->
	<parent>
		<groupId>org.sonatype.oss</groupId>
		<artifactId>oss-parent</artifactId>
		<version>9</version>
	</parent>


	<modelVersion>4.0.0</modelVersion>
	<groupId>org.biojava.thirdparty</groupId>
	<artifactId>forester</artifactId>
	<version>1.039</version>
	<name>Forester</name>
	<description>
		Applications and software libraries for evolutionary biology and comparative genomics research
	</description>

	<scm>
		<connection>scm:git:git://github.com/josemduarte/forester.git</connection>
		<developerConnection>scm:git:git@github.com:josemduarte/forester.git</developerConnection>
		<url>https://github.com/josemduarte/forester.git</url>
		<tag>HEAD</tag>
	</scm>

	<developers>
		<developer>
			<id>cmzmasek</id>
			<name>Christian Zmasek</name>
		</developer>
		<developer>
			<id>josemduarte</id>
			<name>Jose Manuel Duarte</name>
			<email>jose.m.duarte@gmail.com</email>
		</developer>
	</developers>

	<!-- The jboss repository is needed to get the openchart dependency below -->
	<repositories>
		<repository>
			<id>jboss-third-party</id>
			<name>Jboss third party repo</name>
			<url>https://repository.jboss.org/nexus/content/repositories/thirdparty-releases/</url>
		</repository>
	</repositories>

	<dependencies>

		<dependency>
			<groupId>commons-codec</groupId>
			<artifactId>commons-codec</artifactId>
			<version>1.5</version>
		</dependency>

		<dependency>
			<groupId>com.itextpdf</groupId>
			<artifactId>itextpdf</artifactId>
			<version>5.1.0</version>
			<!-- Due to licensing restrictions with itextpdf, we make it scope=provided 
				so that it can be provided as a separate jar at runtime -->
			<scope>provided</scope>
		</dependency>

		<!-- This comes from the jboss repo, see above -->
		<dependency>
			<groupId>openchart</groupId>
			<artifactId>openchart</artifactId>
			<version>1.4.2</version>
		</dependency>



	</dependencies>

	<build>

		<plugins>

			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-compiler-plugin</artifactId>
				<version>3.1</version>
				<configuration>
					<source>1.7</source>
					<target>1.7</target>
				</configuration>
			</plugin>

			<plugin>
				<groupId>org.sonatype.plugins</groupId>
				<artifactId>nexus-staging-maven-plugin</artifactId>
				<version>1.6.6</version>
				<extensions>true</extensions>
				<configuration>
					<serverId>ossrh</serverId>
					<nexusUrl>https://oss.sonatype.org/</nexusUrl>
					<autoReleaseAfterClose>true</autoReleaseAfterClose>
				</configuration>
			</plugin>

			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-javadoc-plugin</artifactId>
				<version>2.10.3</version>
				<executions>
					<execution>
						<id>attach-javadocs</id>
						<goals>
							<goal>jar</goal>
						</goals>
					</execution>
				</executions>

			</plugin>

			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-source-plugin</artifactId>
				<version>2.4</version>
				<executions>
					<execution>
						<id>attach-sources</id>
						<goals>
							<goal>jar</goal>
						</goals>
					</execution>
				</executions>
			</plugin>

			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-gpg-plugin</artifactId>
				<version>1.6</version>
				<executions>
					<execution>
						<id>sign-artifacts</id>
						<phase>verify</phase>
						<goals>
							<goal>sign</goal>
						</goals>
					</execution>
				</executions>
			</plugin>

		</plugins>

		<resources>

			<resource>
				<directory>forester/resources/phyloxml_schema/1.10</directory>
				<includes>
					<include>phyloxml.xsd</include>
				</includes>
			</resource>

			<resource>
				<directory>forester/resources/synth_laf/</directory>
				<includes>
					<include>synth_look_and_feel_1.xml</include>
				</includes>
			</resource>


		</resources>

	</build>

	<distributionManagement>
		<snapshotRepository>
			<id>ossrh</id>
			<url>https://oss.sonatype.org/content/repositories/snapshots</url>
		</snapshotRepository>
	</distributionManagement>

</project>