Description

<dependency>
    <groupId>net.maizegenetics</groupId>
    <artifactId>tassel</artifactId>
    <version>5.2.98</version>
</dependency>

<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 https://maven.apache.org/xsd/maven-4.0.0.xsd" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <!-- This module was also published with a richer model, Gradle metadata,  -->
  <!-- which should be used instead. Do not delete the following line which  -->
  <!-- is to indicate to Gradle or any Gradle module metadata file consumer  -->
  <!-- that they should prefer consuming it instead. -->
  <!-- do_not_remove: published-with-gradle-metadata -->
  <modelVersion>4.0.0</modelVersion>
  <groupId>net.maizegenetics</groupId>
  <artifactId>tassel</artifactId>
  <version>5.2.98</version>
  <name>TASSEL</name>
  <description>TASSEL is a software package to evaluate traits associations, evolutionary patterns, and linkage disequilibrium. </description>
  <url>https://www.maizegenetics.net/tassel</url>
  <licenses>
    <license>
      <name>The Apache License, Version 2.0</name>
      <url>http://www.apache.org/licenses/LICENSE-2.0.txt</url>
    </license>
  </licenses>
  <developers>
    <developer>
      <id>tmc46</id>
      <name>Terry Casstevens</name>
      <email>tmc46@cornell.edu</email>
    </developer>
    <developer>
      <name>Ed Buckler</name>
      <email>esb33@cornell.edu</email>
    </developer>
    <developer>
      <name>Zack Miller</name>
      <email>zrm22@cornell.edu</email>
    </developer>
    <developer>
      <name>Lynn Johnson</name>
      <email>lcj34@cornell.edu</email>
    </developer>
    <developer>
      <name>Peter Bradbury</name>
      <email>pjb39@cornell.edu</email>
    </developer>
    <developer>
      <name>Brandon Monier</name>
      <email>bm646@cornell.edu</email>
    </developer>
  </developers>
  <scm>
    <connection>scm:git:git://github.com/maize-genetics/tassel.git</connection>
    <developerConnection>scm:git:ssh://github.com/maize-genetics/tassel.git</developerConnection>
    <url>https://github.com/maize-genetics/tassel</url>
  </scm>
  <dependencies>
    <dependency>
      <groupId>com.formdev</groupId>
      <artifactId>flatlaf</artifactId>
      <version>3.7.1</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.apache.logging.log4j</groupId>
      <artifactId>log4j-api</artifactId>
      <version>2.21.1</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.apache.logging.log4j</groupId>
      <artifactId>log4j-core</artifactId>
      <version>2.21.1</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>com.google.guava</groupId>
      <artifactId>guava</artifactId>
      <version>22.0</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.apache.commons</groupId>
      <artifactId>commons-math3</artifactId>
      <version>3.4.1</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>commons-codec</groupId>
      <artifactId>commons-codec</artifactId>
      <version>1.10</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.biojava</groupId>
      <artifactId>biojava-core</artifactId>
      <version>6.0.4</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.biojava</groupId>
      <artifactId>biojava-alignment</artifactId>
      <version>6.0.4</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.biojava</groupId>
      <artifactId>biojava-phylo</artifactId>
      <version>4.2.12</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.jfree</groupId>
      <artifactId>jfreechart</artifactId>
      <version>1.0.19</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.jfree</groupId>
      <artifactId>jfreesvg</artifactId>
      <version>3.2</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>net.sf.trove4j</groupId>
      <artifactId>trove4j</artifactId>
      <version>3.0.3</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.ejml</groupId>
      <artifactId>ejml-ddense</artifactId>
      <version>0.41</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.xerial.snappy</groupId>
      <artifactId>snappy-java</artifactId>
      <version>1.1.8.4</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>javax.mail</groupId>
      <artifactId>mail</artifactId>
      <version>1.4</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>com.googlecode.json-simple</groupId>
      <artifactId>json-simple</artifactId>
      <version>1.1.1</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.glassfish</groupId>
      <artifactId>javax.json</artifactId>
      <version>1.0.4</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.xerial</groupId>
      <artifactId>sqlite-jdbc</artifactId>
      <version>3.39.2.1</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>com.github.samtools</groupId>
      <artifactId>htsjdk</artifactId>
      <version>2.24.1</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.ahocorasick</groupId>
      <artifactId>ahocorasick</artifactId>
      <version>0.2.4</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.postgresql</groupId>
      <artifactId>postgresql</artifactId>
      <version>42.6.0</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.apache.avro</groupId>
      <artifactId>avro</artifactId>
      <version>1.8.1</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>colt</groupId>
      <artifactId>colt</artifactId>
      <version>1.2.0</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.biojava.thirdparty</groupId>
      <artifactId>forester</artifactId>
      <version>1.039</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>cisd</groupId>
      <artifactId>jhdf5</artifactId>
      <version>19.04.1</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.jetbrains.kotlin</groupId>
      <artifactId>kotlin-stdlib-jdk8</artifactId>
      <version>2.1.21</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.ini4j</groupId>
      <artifactId>ini4j</artifactId>
      <version>0.5.4</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>it.unimi.dsi</groupId>
      <artifactId>fastutil</artifactId>
      <version>8.2.2</version>
      <scope>runtime</scope>
    </dependency>
  </dependencies>
</project>