mitcr-groovy
Used in:
components
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- VersionsVersions
- DependentsDependents
- DependenciesDependencies
<dependency>
<groupId>com.milaboratory</groupId>
<artifactId>mitcr-groovy</artifactId>
<version>1.0.3</version>
</dependency><project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>com.milaboratory</groupId>
<artifactId>mitcr-groovy</artifactId>
<version>1.0.3</version>
<packaging>jar</packaging>
<name>mitcr-groovy</name>
<url>http://mitcr.milaboratory.com/</url>
<description>
MiTCR is an open source software package aimed at extraction of information
on repertoire of T-cell clones from Next Generation Sequencing (NGS) data.
It is designed with the knowledge of the critical challenges arising in
everyday processing of immunological data.
</description>
<licenses>
<license>
<name>GNU General Public License, version 3</name>
<url>http://www.gnu.org/licenses/gpl-3.0.html</url>
<distribution>repo</distribution>
</license>
</licenses>
<developers>
<developer>
<id>dbolotin</id>
<email>bolotin.dmitriy@gmail.com</email>
<name>Bolotin Dmitriy</name>
<organization>IBCH RAS</organization>
<organizationUrl>http://www.ibch.ru/</organizationUrl>
<roles>
<role>architect</role>
<role>developer</role>
<role>tester</role>
<role>documentation</role>
</roles>
<timezone>UTC+04:00</timezone>
<url>https://bitbucket.org/dbolotin</url>
</developer>
<developer>
<id>mikesh</id>
<email>mikhail.shugay@gmail.com</email>
<name>Mikhail Shugay</name>
<organization>IBCH RAS</organization>
<organizationUrl>http://www.ibch.ru/</organizationUrl>
<roles>
<role>developer</role>
<role>tester</role>
<role>documentation</role>
</roles>
<timezone>UTC+04:00</timezone>
<url>https://bitbucket.org/mikesh</url>
</developer>
</developers>
<scm>
<connection>scm:hg:http://bitbucket.org/milaboratory/mitcr</connection>
<tag>v1.0.3</tag>
<url>https://bitbucket.org/milaboratory/mitcr/src/?at=v1.0.3</url>
</scm>
<issueManagement>
<system>YouTrack</system>
<url>http://dev.milaboratory.com/</url>
</issueManagement>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
</properties>
<dependencies>
<dependency>
<groupId>com.milaboratory</groupId>
<artifactId>mitcr</artifactId>
<version>${project.version}</version>
</dependency>
<dependency>
<groupId>com.milaboratory</groupId>
<artifactId>mitcr</artifactId>
<version>${project.version}</version>
<classifier>distribution</classifier>
<optional>true</optional>
</dependency>
<dependency>
<groupId>org.codehaus.groovy</groupId>
<artifactId>groovy-all</artifactId>
<version>2.1.6</version>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>4.11</version>
<scope>test</scope>
</dependency>
</dependencies>
<build>
<plugins>
<plugin>
<groupId>org.codehaus.groovy</groupId>
<artifactId>groovy-eclipse-compiler</artifactId>
<version>2.7.0-01</version>
<extensions>true</extensions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-shade-plugin</artifactId>
<version>2.0</version>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>shade</goal>
</goals>
<configuration>
<createDependencyReducedPom>false</createDependencyReducedPom>
<minimizeJar>true</minimizeJar>
<artifactSet>
<!-- <excludes>
<exclude>*:*</exclude>
</excludes> -->
<includes>
<include>com.milaboratory:mitcr:jar:distribution:${project.version}</include>
</includes>
</artifactSet>
<filters>
<filter>
<artifact>com.milaboratory:mitcr:jar:distribution:${project.version}</artifact>
<includes>
<include>**</include>
</includes>
</filter>
</filters>
<!-- <filter>
<artifact>*:*</artifact>
<excludes>
<exclude>META-INF/localization/*</exclude>
<exclude>META-INF/*.txt</exclude>
<exclude>META-INF/*.xml</exclude>
<exclude>JDOMAbout*.class</exclude>
</excludes>
</filter>
</filters> -->
<!-- <outputFile>target/mitcr.jar</outputFile> -->
<!-- <transformers>
<transformer
implementation="org.apache.maven.plugins.shade.resource.ManifestResourceTransformer">
<mainClass>com.milaboratory.mitcr.cli.Main</mainClass>
</transformer>
<transformer
implementation="org.apache.maven.plugins.shade.resource.IncludeResourceTransformer">
<resource>META-INF/README</resource>
<file>README.txt</file>
</transformer>
<transformer
implementation="org.apache.maven.plugins.shade.resource.IncludeResourceTransformer">
<resource>META-INF/LICENSE</resource>
<file>LICENSE.txt</file>
</transformer>
<transformer
implementation="org.apache.maven.plugins.shade.resource.IncludeResourceTransformer">
<resource>META-INF/AUTHORS</resource>
<file>AUTHORS.txt</file>
</transformer>
<transformer
implementation="org.apache.maven.plugins.shade.resource.IncludeResourceTransformer">
<resource>META-INF/NOTICE</resource>
<file>NOTICE.txt</file>
</transformer>
</transformers> -->
<shadedArtifactAttached>true</shadedArtifactAttached>
<shadedClassifierName>distribution</shadedClassifierName>
</configuration>
</execution>
</executions>
</plugin>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>2.3.2</version>
<configuration>
<compilerId>groovy-eclipse-compiler</compilerId>
</configuration>
<dependencies>
<dependency>
<groupId>org.codehaus.groovy</groupId>
<artifactId>groovy-eclipse-compiler</artifactId>
<version>2.7.0-01</version>
</dependency>
</dependencies>
</plugin>
</plugins>
</build>
</project>