picard
Used in:
components
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- DependentsDependents
- DependenciesDependencies
<dependency>
<groupId>com.github.broadinstitute</groupId>
<artifactId>picard</artifactId>
<version>3.4.0</version>
</dependency><?xml version="1.0" encoding="UTF-8"?>
<project xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 https://maven.apache.org/xsd/maven-4.0.0.xsd" xmlns="http://maven.apache.org/POM/4.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
<!-- This module was also published with a richer model, Gradle metadata, -->
<!-- which should be used instead. Do not delete the following line which -->
<!-- is to indicate to Gradle or any Gradle module metadata file consumer -->
<!-- that they should prefer consuming it instead. -->
<!-- do_not_remove: published-with-gradle-metadata -->
<modelVersion>4.0.0</modelVersion>
<groupId>com.github.broadinstitute</groupId>
<artifactId>picard</artifactId>
<version>3.4.0</version>
<name>Picard</name>
<description>A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.</description>
<url>http://broadinstitute.github.io/picard/</url>
<licenses>
<license>
<name>MIT License</name>
<url>http://opensource.org/licenses/MIT</url>
<distribution>repo</distribution>
</license>
</licenses>
<developers>
<developer>
<id>picard</id>
<name>Picard Team</name>
<url>http://broadinstitute.github.io/picard</url>
</developer>
</developers>
<scm>
<connection>scm:git:git@github.com:broadinstitute/picard.git</connection>
<url>git@github.com:broadinstitute/picard.git</url>
</scm>
<dependencyManagement>
<dependencies>
<dependency>
<groupId>org.apache.logging.log4j</groupId>
<artifactId>log4j-api</artifactId>
<version>2.20.0</version>
</dependency>
<dependency>
<groupId>org.apache.logging.log4j</groupId>
<artifactId>log4j-core</artifactId>
<version>2.20.0</version>
</dependency>
</dependencies>
</dependencyManagement>
<dependencies>
<dependency>
<groupId>com.github.samtools</groupId>
<artifactId>htsjdk</artifactId>
<version>4.2.0</version>
<scope>compile</scope>
</dependency>
<dependency>
<groupId>org.broadinstitute</groupId>
<artifactId>barclay</artifactId>
<version>5.0.0</version>
<scope>compile</scope>
</dependency>
<dependency>
<groupId>com.intel.gkl</groupId>
<artifactId>gkl</artifactId>
<version>0.8.11</version>
<scope>runtime</scope>
<exclusions>
<exclusion>
<groupId>*</groupId>
<artifactId>htsjdk</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.broadinstitute</groupId>
<artifactId>gatk-native-bindings</artifactId>
<version>1.0.0</version>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>org.openjdk.nashorn</groupId>
<artifactId>nashorn-core</artifactId>
<version>15.4</version>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>com.google.guava</groupId>
<artifactId>guava</artifactId>
<version>32.1.1-jre</version>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>org.apache.commons</groupId>
<artifactId>commons-math3</artifactId>
<version>3.6.1</version>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>org.apache.commons</groupId>
<artifactId>commons-collections4</artifactId>
<version>4.4</version>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>org.apache.commons</groupId>
<artifactId>commons-lang3</artifactId>
<version>3.12.0</version>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>commons-io</groupId>
<artifactId>commons-io</artifactId>
<version>2.11.0</version>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>com.google.cloud</groupId>
<artifactId>google-cloud-nio</artifactId>
<version>0.127.0</version>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>org.broadinstitute</groupId>
<artifactId>http-nio</artifactId>
<version>1.1.1</version>
<scope>runtime</scope>
</dependency>
</dependencies>
</project>
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