Description

<dependency>
    <groupId>com.github.broadinstitute</groupId>
    <artifactId>picard</artifactId>
    <version>3.4.0</version>
</dependency>

<?xml version="1.0" encoding="UTF-8"?>
<project xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 https://maven.apache.org/xsd/maven-4.0.0.xsd" xmlns="http://maven.apache.org/POM/4.0.0"
    xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <!-- This module was also published with a richer model, Gradle metadata,  -->
  <!-- which should be used instead. Do not delete the following line which  -->
  <!-- is to indicate to Gradle or any Gradle module metadata file consumer  -->
  <!-- that they should prefer consuming it instead. -->
  <!-- do_not_remove: published-with-gradle-metadata -->
  <modelVersion>4.0.0</modelVersion>
  <groupId>com.github.broadinstitute</groupId>
  <artifactId>picard</artifactId>
  <version>3.4.0</version>
  <name>Picard</name>
  <description>A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.</description>
  <url>http://broadinstitute.github.io/picard/</url>
  <licenses>
    <license>
      <name>MIT License</name>
      <url>http://opensource.org/licenses/MIT</url>
      <distribution>repo</distribution>
    </license>
  </licenses>
  <developers>
    <developer>
      <id>picard</id>
      <name>Picard Team</name>
      <url>http://broadinstitute.github.io/picard</url>
    </developer>
  </developers>
  <scm>
    <connection>scm:git:git@github.com:broadinstitute/picard.git</connection>
    <url>git@github.com:broadinstitute/picard.git</url>
  </scm>
  <dependencyManagement>
    <dependencies>
      <dependency>
        <groupId>org.apache.logging.log4j</groupId>
        <artifactId>log4j-api</artifactId>
        <version>2.20.0</version>
      </dependency>
      <dependency>
        <groupId>org.apache.logging.log4j</groupId>
        <artifactId>log4j-core</artifactId>
        <version>2.20.0</version>
      </dependency>
    </dependencies>
  </dependencyManagement>
  <dependencies>
    <dependency>
      <groupId>com.github.samtools</groupId>
      <artifactId>htsjdk</artifactId>
      <version>4.2.0</version>
      <scope>compile</scope>
    </dependency>
    <dependency>
      <groupId>org.broadinstitute</groupId>
      <artifactId>barclay</artifactId>
      <version>5.0.0</version>
      <scope>compile</scope>
    </dependency>
    <dependency>
      <groupId>com.intel.gkl</groupId>
      <artifactId>gkl</artifactId>
      <version>0.8.11</version>
      <scope>runtime</scope>
      <exclusions>
        <exclusion>
          <groupId>*</groupId>
          <artifactId>htsjdk</artifactId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.broadinstitute</groupId>
      <artifactId>gatk-native-bindings</artifactId>
      <version>1.0.0</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.openjdk.nashorn</groupId>
      <artifactId>nashorn-core</artifactId>
      <version>15.4</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>com.google.guava</groupId>
      <artifactId>guava</artifactId>
      <version>32.1.1-jre</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.apache.commons</groupId>
      <artifactId>commons-math3</artifactId>
      <version>3.6.1</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.apache.commons</groupId>
      <artifactId>commons-collections4</artifactId>
      <version>4.4</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.apache.commons</groupId>
      <artifactId>commons-lang3</artifactId>
      <version>3.12.0</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>commons-io</groupId>
      <artifactId>commons-io</artifactId>
      <version>2.11.0</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>com.google.cloud</groupId>
      <artifactId>google-cloud-nio</artifactId>
      <version>0.127.0</version>
      <scope>runtime</scope>
    </dependency>
    <dependency>
      <groupId>org.broadinstitute</groupId>
      <artifactId>http-nio</artifactId>
      <version>1.1.1</version>
      <scope>runtime</scope>
    </dependency>
  </dependencies>
</project>