Description

<dependency>
    <groupId>au.csiro.pathling</groupId>
    <artifactId>python</artifactId>
    <version>9.4.0</version>
</dependency>

<?xml version="1.0" encoding="UTF-8"?>
<!--
  ~ Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
  ~ Organisation (CSIRO) ABN 41 687 119 230.
  ~
  ~ Licensed under the Apache License, Version 2.0 (the "License");
  ~ you may not use this file except in compliance with the License.
  ~ You may obtain a copy of the License at
  ~
  ~     http://www.apache.org/licenses/LICENSE-2.0
  ~
  ~ Unless required by applicable law or agreed to in writing, software
  ~ distributed under the License is distributed on an "AS IS" BASIS,
  ~ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
  ~ See the License for the specific language governing permissions and
  ~ limitations under the License.
  -->

<project xmlns="http://maven.apache.org/POM/4.0.0"
  xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
  xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
  <modelVersion>4.0.0</modelVersion>

  <parent>
    <groupId>au.csiro.pathling</groupId>
    <artifactId>pathling</artifactId>
    <version>9.4.0</version>
    <relativePath>../../pom.xml</relativePath>
  </parent>
  <artifactId>python</artifactId>
  <packaging>pom</packaging>

  <name>Pathling Python API</name>
  <description>A library for using Pathling with Python.</description>

  <properties>
    <!--suppress UnresolvedMavenProperty -->
    <pathling.pyapi.version>${parsedVersion.majorVersion}.${parsedVersion.minorVersion}.${parsedVersion.incrementalVersion}${pathling.pyapi.version.qualifier}</pathling.pyapi.version>
    <pathling.pyapi.version.qualifier>.dev</pathling.pyapi.version.qualifier>
    <pathling.pypi.repository>pypi</pathling.pypi.repository>
  </properties>

  <dependencies>
    <dependency>
      <groupId>au.csiro.pathling</groupId>
      <artifactId>library-runtime</artifactId>
    </dependency>
  </dependencies>

  <build>
    <sourceDirectory>${project.basedir}</sourceDirectory>
    <plugins>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-clean-plugin</artifactId>
        <configuration>
          <filesets>
            <fileset>
              <directory>${project.basedir}</directory>
              <includes>
                <include>.coverage</include>
                <include>pathling/_version.py</include>
                <include>build</include>
                <include>build/**/*</include>
                <include>.pytest_cache</include>
                <include>pathling.egg-info</include>
                <include>pathling.egg-info/**/*</include>
                <include>**/.ipynb_checkpoints</include>
                <include>metastore_db</include>
                <include>metastore_db/**/*</include>
                <include>derby.log</include>
              </includes>
            </fileset>
          </filesets>
        </configuration>
      </plugin>
      <plugin>
        <groupId>org.codehaus.mojo</groupId>
        <artifactId>exec-maven-plugin</artifactId>
        <executions>
          <!-- Install dependencies -->
          <execution>
            <id>ensure-venv</id>
            <phase>initialize</phase>
            <goals>
              <goal>exec</goal>
            </goals>
            <configuration>
              <executable>uv</executable>
              <arguments>
                <argument>venv</argument>
                <argument>--allow-existing</argument>
                <argument>-p 3.9</argument>
                <argument>.venv</argument>
              </arguments>
            </configuration>
          </execution>

          <!-- Install dependencies -->
          <execution>
            <id>install-dependencies</id>
            <phase>generate-resources</phase>
            <goals>
              <goal>exec</goal>
            </goals>
            <configuration>
              <executable>uv</executable>
              <arguments>
                <argument>sync</argument>
              </arguments>
            </configuration>
          </execution>

          <!-- Build Python distributions -->
          <execution>
            <id>python-package</id>
            <phase>package</phase>
            <goals>
              <goal>exec</goal>
            </goals>
            <configuration>
              <executable>uv</executable>
              <arguments>
                <argument>run</argument>
                <argument>python</argument>
                <argument>-m</argument>
                <argument>build</argument>
                <argument>--outdir</argument>
                <argument>${project.build.directory}/py-dist</argument>
              </arguments>
            </configuration>
          </execution>

          <!-- Install package -->
          <execution>
            <id>install</id>
            <phase>pre-integration-test</phase>
            <goals>
              <goal>exec</goal>
            </goals>
            <configuration>
              <executable>uv</executable>
              <arguments>
                <argument>pip</argument>
                <argument>install</argument>
                <argument>.</argument>
              </arguments>
            </configuration>
          </execution>
        </executions>
      </plugin>
      <plugin>
        <groupId>ru.yaal.maven</groupId>
        <artifactId>write-text-files-maven-plugin</artifactId>
        <version>1.1</version>
        <configuration>
          <charset>UTF-8</charset>
          <files>
            <file>
              <path>pathling/_version.py</path>
              <lines>
                <line>#</line>
                <line># Auto generated from POM project version.</line>
                <line># Please do not modify.</line>
                <line>#</line>
                <line>__version__="${pathling.pyapi.version}"</line>
                <line>__java_version__="${project.version}"</line>
                <line>__scala_version__="${pathling.scalaVersion}"</line>
                <line>__delta_version__="${pathling.deltaVersion}"</line>
                <line>__hadoop_version__="${pathling.hadoopVersion}"</line>
              </lines>
            </file>
          </files>
        </configuration>
        <executions>
          <execution>
            <id>write-text-files</id>
            <phase>generate-sources</phase>
            <goals>
              <goal>write-text-files</goal>
            </goals>
          </execution>
        </executions>
      </plugin>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-deploy-plugin</artifactId>
        <configuration>
          <skip>true</skip>
        </configuration>
      </plugin>
    </plugins>
  </build>

  <profiles>
    <profile>
      <id>pythonTests</id>
      <activation>
        <property>
          <name>!skipTests</name>
        </property>
      </activation>
      <build>
        <plugins>
          <plugin>
            <groupId>org.codehaus.mojo</groupId>
            <artifactId>exec-maven-plugin</artifactId>
            <executions>
              <!-- Check Python code with ruff linter -->
              <execution>
                <id>ruff-check</id>
                <phase>test</phase>
                <goals>
                  <goal>exec</goal>
                </goals>
                <configuration>
                  <executable>uv</executable>
                  <workingDirectory>${project.basedir}</workingDirectory>
                  <arguments>
                    <argument>run</argument>
                    <argument>ruff</argument>
                    <argument>check</argument>
                    <argument>.</argument>
                  </arguments>
                </configuration>
              </execution>
              <!-- Check Python code formatting with ruff -->
              <execution>
                <id>ruff-format-check</id>
                <phase>test</phase>
                <goals>
                  <goal>exec</goal>
                </goals>
                <configuration>
                  <executable>uv</executable>
                  <workingDirectory>${project.basedir}</workingDirectory>
                  <arguments>
                    <argument>run</argument>
                    <argument>ruff</argument>
                    <argument>format</argument>
                    <argument>--check</argument>
                    <argument>.</argument>
                  </arguments>
                </configuration>
              </execution>
              <!-- Run the Python tests -->
              <execution>
                <id>python-tests</id>
                <phase>test</phase>
                <goals>
                  <goal>exec</goal>
                </goals>
                <configuration>
                  <executable>uv</executable>
                  <workingDirectory>${project.basedir}</workingDirectory>
                  <arguments>
                    <argument>run</argument>
                    <argument>pytest</argument>
                    <argument>-x</argument>
                    <argument>tests</argument>
                    <argument>--cov=pathling</argument>
                    <argument>--cov-report=html:target/coverage/html</argument>
                    <argument>--cov-report=xml:target/coverage/coverage.xml</argument>
                    <argument>--cov-report=annotate:target/coverage/annotate</argument>
                    <argument>-v</argument>
                  </arguments>
                  <environmentVariables>
                    <PYTHONPATH>${project.basedir}</PYTHONPATH>
                    <PYSPARK_PYTHON>${project.basedir}/.venv/bin/python</PYSPARK_PYTHON>
                  </environmentVariables>
                </configuration>
              </execution>

              <!-- Test spark-submit -->
              <execution>
                <id>spark-submit-test</id>
                <phase>integration-test</phase>
                <goals>
                  <goal>exec</goal>
                </goals>
                <configuration>
                  <executable>uv</executable>
                  <arguments>
                    <argument>run</argument>
                    <argument>spark-submit</argument>
                    <argument>--packages</argument>
                    <argument>au.csiro.pathling:library-runtime:${project.version},io.delta:delta-spark_${pathling.scalaVersion}:${pathling.deltaVersion}</argument>
                    <argument>--conf</argument>
                    <argument>spark.sql.extensions=io.delta.sql.DeltaSparkSessionExtension</argument>
                    <argument>--conf</argument>
                    <argument>spark.sql.catalog.spark_catalog=org.apache.spark.sql.delta.catalog.DeltaCatalog</argument>
                    <argument>--conf</argument>
                    <argument>spark.sql.mapKeyDedupPolicy=LAST_WIN</argument>
                    <argument>${project.basedir}/examples/fhir_view.py</argument>
                  </arguments>
                  <environmentVariables>
                    <PYSPARK_PYTHON>${project.basedir}/.venv/bin/python</PYSPARK_PYTHON>
                  </environmentVariables>
                </configuration>
              </execution>
            </executions>
          </plugin>
        </plugins>
      </build>
    </profile>
    <profile>
      <id>docs</id>
      <build>
        <plugins>
          <plugin>
            <groupId>org.codehaus.mojo</groupId>
            <artifactId>exec-maven-plugin</artifactId>
            <executions>
              <!-- Build Python documentation -->
              <execution>
                <id>python-generate-docs</id>
                <phase>process-resources</phase>
                <goals>
                  <goal>exec</goal>
                </goals>
                <configuration>
                  <executable>uv</executable>
                  <arguments>
                    <argument>run</argument>
                    <argument>sphinx-apidoc</argument>
                    <argument>--force</argument>
                    <argument>--full</argument>
                    <argument>-o</argument>
                    <argument>${project.build.directory}/docs</argument>
                    <argument>-t</argument>
                    <argument>${project.basedir}/docs/templates/</argument>
                    <argument>pathling</argument>
                  </arguments>
                </configuration>
              </execution>
              <execution>
                <id>python-compile-docs</id>
                <phase>compile</phase>
                <goals>
                  <goal>exec</goal>
                </goals>
                <configuration>
                  <executable>make</executable>
                  <arguments>
                    <argument>-C</argument>
                    <argument>${project.build.directory}/docs</argument>
                    <argument>clean</argument>
                    <argument>html</argument>
                  </arguments>
                  <environmentVariables>
                    <SPHINXBUILD>uv run sphinx-build</SPHINXBUILD>
                  </environmentVariables>
                </configuration>
              </execution>
            </executions>
          </plugin>

          <!-- Create a JAR containing the Python docs -->
          <plugin>
            <groupId>org.apache.maven.plugins</groupId>
            <artifactId>maven-jar-plugin</artifactId>
            <executions>
              <execution>
                <id>docs-jar</id>
                <phase>package</phase>
                <goals>
                  <goal>jar</goal>
                </goals>
                <configuration>
                  <classesDirectory>${project.build.directory}/docs/_build/html</classesDirectory>
                  <classifier>docs</classifier>
                </configuration>
              </execution>
            </executions>
          </plugin>
        </plugins>
      </build>
    </profile>
    <profile>
      <id>pythonRelease</id>
      <properties>
        <pathling.pyapi.version.qualifier/>
      </properties>
      <build>
        <plugins>
          <plugin>
            <groupId>org.codehaus.mojo</groupId>
            <artifactId>exec-maven-plugin</artifactId>
            <executions>
              <!-- Deploy package to PyPI -->
              <execution>
                <id>deploy</id>
                <phase>deploy</phase>
                <goals>
                  <goal>exec</goal>
                </goals>
                <configuration>
                  <executable>uv</executable>
                  <arguments>
                    <argument>run</argument>
                    <argument>twine</argument>
                    <argument>upload</argument>
                    <argument>--verbose</argument>
                    <argument>--skip-existing</argument>
                    <argument>--repository</argument>
                    <argument>${pathling.pypi.repository}</argument>
                    <argument>${project.build.directory}/py-dist/*</argument>
                  </arguments>
                </configuration>
              </execution>
            </executions>
          </plugin>
        </plugins>
      </build>
    </profile>
    <profile>
      <id>pythonPreRelease</id>
      <build>
        <plugins>
          <plugin>
            <groupId>org.codehaus.mojo</groupId>
            <artifactId>exec-maven-plugin</artifactId>
            <executions>
              <!-- Deploy package to PyPI -->
              <execution>
                <id>deploy</id>
                <phase>deploy</phase>
                <goals>
                  <goal>exec</goal>
                </goals>
                <configuration>
                  <executable>uv</executable>
                  <arguments>
                    <argument>run</argument>
                    <argument>twine</argument>
                    <argument>upload</argument>
                    <argument>--verbose</argument>
                    <argument>--repository</argument>
                    <argument>${pathling.pypi.repository}</argument>
                    <argument>${project.build.directory}/py-dist/*</argument>
                  </arguments>
                </configuration>
              </execution>
            </executions>
          </plugin>
        </plugins>
      </build>
    </profile>
    <profile>
      <id>format</id>
      <build>
        <plugins>
          <plugin>
            <groupId>org.codehaus.mojo</groupId>
            <artifactId>exec-maven-plugin</artifactId>
            <executions>
              <!-- Format Python code with ruff -->
              <execution>
                <id>ruff-format</id>
                <phase>validate</phase>
                <goals>
                  <goal>exec</goal>
                </goals>
                <configuration>
                  <executable>uv</executable>
                  <workingDirectory>${project.basedir}</workingDirectory>
                  <arguments>
                    <argument>run</argument>
                    <argument>ruff</argument>
                    <argument>format</argument>
                    <argument>.</argument>
                  </arguments>
                </configuration>
              </execution>
              <!-- Fix Python code issues with ruff -->
              <execution>
                <id>ruff-fix</id>
                <phase>validate</phase>
                <goals>
                  <goal>exec</goal>
                </goals>
                <configuration>
                  <executable>uv</executable>
                  <workingDirectory>${project.basedir}</workingDirectory>
                  <arguments>
                    <argument>run</argument>
                    <argument>ruff</argument>
                    <argument>check</argument>
                    <argument>--fix</argument>
                    <argument>.</argument>
                  </arguments>
                </configuration>
              </execution>
            </executions>
          </plugin>
        </plugins>
      </build>
    </profile>
  </profiles>
</project>